BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027F01LP1|AL428750
(861 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1063 1654 0.0
>3x_Contig1063
Length = 5012
Score = 1654 bits (832), Expect = 0.0
Identities = 849/856 (99%), Gaps = 1/856 (0%)
Strand = Plus / Minus
Query: 1 cattaacttaccatgtctactgcctaaatgcataaagtttcagttttttttcacaaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2820 cattaacttaccatgtctactgcctaaatgcataaagtttcagttttttttcacaaaatt 2761
Query: 61 ggtacctgattgttgtagaaaaaacgtgaccagagttgcgacactgcctcaatgaatacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2760 ggtacctgattgttgtagaaaaaacgtgaccagagttgcgacactgcctcaatgaatacc 2701
Query: 121 gactcattcctgaaggcatcgaataaagaaacatatagtcattggcggtcaatttctgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2700 gactcattcctgaaggcatcgaataaagaaacatatagtcattggcggtcaatttctgga 2641
Query: 181 gatttgaaagtgaattcaatctatcaaacttgatattcaacctccttagtttctgaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2640 gatttgaaagtgaattcaatctatcaaacttgatattcaacctccttagtttctgaatta 2581
Query: 241 tgatgttttgactattacgtggcttctgagctttcaggtgttcacctctaatactgttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2580 tgatgttttgactattacgtggcttctgagctttcaggtgttcacctctaatactgttct 2521
Query: 301 ttgatggtatcgagaaggcaacaaacaaaatctcgaagatcatgatcttcctcatctttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2520 ttgatggtatcgagaaggcaacaaacaaaatctcgaagatcatgatcttcctcatctttt 2461
Query: 361 tgaaatttattaaagaatactacaacttttttagacttccgtggaaaacatttcctattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2460 tgaaatttattaaagaatactacaacttttttagacttccgtggaaaacatttcctattt 2401
Query: 421 aaagcaaaaaacgagctttcctttagttaattgaggtttttgacggtcaacataagtsaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2400 aaagcaaaaaacgagctttcctttagttaattgaggtttttgacggtcaacataagtaaa 2341
Query: 481 tctaggaatactatcaccatttaatctctagttagcattccgtaaaaaatttgtggcacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2340 tctaggaatactatcaccatttaatctctagttagcattccgtaaaaaatttgtggcacg 2281
Query: 541 acatactctctgctgttttctcctttgttacatttttgagcgctgcatcgaccgttctat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2280 acatactctctgctgttttctcctttgttacatttttgagcgctgcatcgaccgttctat 2221
Query: 601 gttttgtttaaatatgcaggatacgccatttttgtattttaattccgaattaataacgac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2220 gttttgtttaaatatgcaggatacgccatttttgtattttaattccgaattaataacgac 2161
Query: 661 ttgaagagcattttttccctaaactgaaccttaaactcaaaacaataacagaaaaattcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2160 ttgaagagcattttttccctaaactgaaccttaaactcaaaacaataacagaaaaattcc 2101
Query: 721 gtaaaaaacttgaatctgtgcgctaaaaaagctgtttcttaattgaatgaattttggatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2100 gtaaaaaacttgaatctgtgcgctaaaaaagctgtttcttaattgaatgaattttggatg 2041
Query: 781 ggagatatatatatntntbcbcacacatcaagataaataagtaactgattg-aaawctat 839
|||||||||||||| | | | |||||||||||||||||||||||||||||| ||| ||||
Sbjct: 2040 ggagatatatatatatattctcacacatcaagataaataagtaactgattgaaaatctat 1981
Query: 840 attcttctatattata 855
||||||||||||||||
Sbjct: 1980 attcttctatattata 1965
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7673
Number of Sequences: 1807
Number of extensions: 7673
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 861
length of database: 10,358,551
effective HSP length: 16
effective length of query: 845
effective length of database: 10,329,639
effective search space: 8728544955
effective search space used: 8728544955
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)